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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRTFDC1, phosphoribosyl transferase domain containing 1
Sequence ID:NM_020200
Entrez Gene ID:56952
Ensembl ID:ENSG00000099256

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10p12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 25138530 - 25241523

NM_020200 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
112672513755325138819
126813442514031625140392
134513912514424625144292
139214742514584125145923
147514922514732025147337
149315582516092625160991
155917422522611225226295
174318492523125825231364
185019262524145625241532

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3871911Full LengthBC008662phosphoribosyl transferase domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064585  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020200 NP_064585 Q9NRG1 Pribosyltran

Related Sequences

 
mRNAGenPeptSwissProt
AF226056 AAF86956 Q9NRG1
BC008662 AAH08662 Q9NRG1
HQ447120 ADQ31607  
AK021950 BAB13944 Q9NRG1
AB209792 BAD93029 Q9NRG1
AK222674 BAD96394 Q9NRG1
AK294130 BAH11679 Q9NRG1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRTFDC1 NP_064585 R.norvegicus Prtfdc1 291355   NP_001099597 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)