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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PHOSPHO1, phosphatase, orphan 1
Sequence ID:NM_001143804
NM_178500
Entrez Gene ID:162466
Ensembl ID:ENSG00000173868

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 47300731 - 47308128

 Exon Info From UCSC:
NM_001143804
NM_178500

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40125738Full LengthBC117187phosphatase, orphan 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848595  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001143804 NP_001137276      
NM_178500 NP_848595 Q8TCT1 EC 3.1.3.75 Put_Phosphatase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC117187 AAI17188 Q8TCT1 EC 3.1.3.75
AJ457189 CAD29803 Q8TCT1 EC 3.1.3.75

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PHOSPHO1 NP_001137276 M.musculus Phospho1 237928 Gene Info NP_694744 93
R.norvegicus Phospho1 287644   NP_001099303 92
A.thaliana PS2 843632   NP_565052 32
A.thaliana AT1G17710 838347   NP_173213 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)