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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HDAC11, histone deacetylase 11
Sequence ID:NM_001136041
NM_024827
Entrez Gene ID:79885
Ensembl ID:ENSG00000163517

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 13521823 - 13546834

 Exon Info From UCSC:
NM_001136041
NM_024827

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3906049Full LengthBC009676histone deacetylase 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079103  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001136041 NP_001129513      
NM_024827 NP_079103 Q96DB2 EC 3.5.1.98 Hist_deacetyl

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC009676 AAH09676 Q96DB2 EC 3.5.1.98
AK025426 BAB15127 Q96DB2
Q6IA14
EC 3.5.1.98
AK025890 BAB15272 Q96DB2 EC 3.5.1.98
AK293223 BAG56762 Q96DB2 EC 3.5.1.98
AK299021 BAG61100 B4DQY8  
AL137362 CAB70712 Q96DB2 EC 3.5.1.98
CR457341 CAG33622 Q6IA14  
AL834223 CAH56375 Q658J9  
AM393042 CAL37920 Q96DB2 EC 3.5.1.98
AM393825 CAL38700    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HDAC11 NP_079103 M.musculus Hdac11 232232 Gene Info NP_659168 92
R.norvegicus Hdac11 297453   NP_001100080 85
A.thaliana HDA2 832673   NP_568480 59
A.gambiae AgaP_AGAP001736 1281439   XP_321350 57
D.melanogaster HdacX 326120   NP_733048 53
C.elegans C35A5.9 183226   NP_505699 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)