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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PPAPDC1A, Phosphatidic acid phosphatase type 2 domain containing 1A
Sequence ID:NM_001030059
Entrez Gene ID:196051
Ensembl ID:ENSG00000203805

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q26.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 122263090 - 122349363

NM_001030059 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1408122216465122216872
409517122263329122263437
518608122273422122273512
609672122278344122278407
673797122280482122280606
798968122334642122334812
9691521122348814122349366

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40024099Full LengthBC101268phosphatidic acid phosphatase type 2 domain containing 1A
40146809Full LengthBC132787phosphatidic acid phosphatase type 2 domain containing 1A

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001030059 NP_001025230 Q5VZY2 EC 3.1.3.4  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC101267 AAI01268 Q5VZY2 EC 3.1.3.4
BC101268 AAI01269 Q5VZY2 EC 3.1.3.4
BC101269 AAI01270 Q5VZY2 EC 3.1.3.4
BC122535 AAI22536 Q5VZY2 EC 3.1.3.4
BC132787 AAI32788 Q5VZY2 EC 3.1.3.4
HQ258170 ADR82924    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPAPDC1A NP_001025230 R.norvegicus Ppapdc1a 309014   XP_219376 100
M.musculus Ppapdc1a 381925 Gene Info NP_001074432 99
A.gambiae AgaP_AGAP001941 1281183   XP_321121 53
D.melanogaster CG12746 40672   NP_649551 48
A.thaliana LPP2 838072   NP_172961 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)