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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LHX8, LIM homeobox 8
Sequence ID:NM_001001933
NM_001256114
Entrez Gene ID:431707
Ensembl ID:ENSG00000162624

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 75600566 - 75627218

Transcript StartTranscript EndChromosomal Start Chromosomal End
11757559411875594292
1766827559591075596416
6837697560228775602373
7709317560278475602945
93210537560666975606790
105412747560880275609022
127513787560952975609632
137914747561427175614366
147516587562257775622760
165923717562650375627215

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4839343Full LengthBC040321LIM homeobox 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001001933  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001001933 NP_001001933 Q68G74 Homeobox
LIM
NM_001256114 NP_001243043    

Related Sequences

 
mRNAGenPeptSwissProt
BC040321 AAH40321 Q68G74
HQ447486 ADQ31972  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LHX8 NP_001001933 M.musculus Lhx8 16875 Gene Info NP_034843 97
R.norvegicus Lhx8 365963   NP_001012219 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)