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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ECI1, enoyl-CoA delta isomerase 1
Sequence ID:NM_001178029
NM_001919
Entrez Gene ID:1632
Ensembl ID:ENSG00000167969

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 2289899 - 2301602

 Exon Info From UCSC:
NM_001178029
NM_001919

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821822Full LengthBC000762dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase)
2821822Full LengthBC019316dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase)
3630566Full LengthBC002746dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase)
3877066Full LengthBC009631dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase)
4541779Full LengthBC020228dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001910  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001178029 NP_001171500      
NM_001919 NP_001910 P42126 EC 5.3.3.8 ECH

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L24774 AAA35485 P42126 EC 5.3.3.8
BC000762 AAH00762 P42126 EC 5.3.3.8
BC002746 AAH02746 P42126 EC 5.3.3.8
BC009631 AAH09631 Q96DC0  
BC019316 AAH19316 P42126 EC 5.3.3.8
BC020228 AAH20228 P42126 EC 5.3.3.8
AK291127 BAF83816 P42126 EC 5.3.3.8
Z25820 CAA81065 P42126 EC 5.3.3.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ECI1 NP_001910 R.norvegicus Eci1 29740   NP_059002 77
M.musculus Eci1 13177 Gene Info NP_034153 74
A.gambiae AgaP_AGAP010130 3292126   XP_554016 43
D.melanogaster CG4598 34315   NP_609322 41
D.melanogaster CG4594 34316   NP_609323 40
D.melanogaster CG4592 34317   NP_609324 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)