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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IRF4, Interferon regulatory factor 4
Sequence ID:NM_002460
NM_001195286
RefSeqGene ID:NG_027728
Entrez Gene ID:3662
Ensembl ID:ENSG00000137265

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MULTIPLE MYELOMACCND1
LIG4

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p25-p23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 391751 - 401867

Transcript StartTranscript EndChromosomal Start Chromosomal End
158391751391808
59329393097393367
330516394820395006
517605395846395934
606750397107397251
751858398827398934
8591212401423401776
12131325405017405129
13265313407454411441

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4861223Full LengthBC015752interferon regulatory factor 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002451  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001195286 NP_001182215    
NM_002460 NP_002451 Q15306 IRF

Related Sequences

 
mRNAGenPeptSwissProt
U63738 AAB37258 Q15306
U52682 AAC50779 Q15306
BC015752 AAH15752 Q15306
DQ893472 ABM84398  
DQ896302 ABM87301  
D78261 BAA11335 Q99419

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IRF4 NP_002451 M.musculus Irf4 16364 Gene Info NP_038702 92
R.norvegicus Irf4 291100   NP_001099578 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta