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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DSCAM, Down syndrome cell adhesion molecule
Sequence ID:NM_001271534
NM_001389
NR_073202
Entrez Gene ID:1826
Ensembl ID:ENSG00000171587

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 41384340 - 42218622


Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001380  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271534 NP_001258463    
NM_001389 NP_001380 O60469 fn3
ig
I-set

Related Sequences

 
mRNAGenPeptSwissProt
AF023449 AAC17966 O60469
AF023450 AAC17967 O60469
AF217525 AAF27525 O60469
AF289030 AAL56711 Q8WY19
AB209136 BAD92373 Q59GH3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DSCAM NP_001380 R.norvegicus Dscam 171119   NP_598271 98
M.musculus Dscam 13508 Gene Info NP_112451 98
A.gambiae AgaP_AGAP007092 1270011   XP_308666 35
D.melanogaster CG42330 2769008   NP_001036596 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)