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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. WDR5, WD repeat domain 5
Sequence ID:NM_017588
NM_052821
Entrez Gene ID:11091
Ensembl ID:ENSG00000196363

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 137004913 - 137023776

 Exon Info From UCSC:
NM_017588
NM_052821

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3538255Full LengthBC001635WD repeat domain 5
4647335IncompleteBC015594WD repeat domain 5
5195095IncompleteBC029769WD repeat domain 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_438172  NP_060058  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017588 NP_060058 P61964 WD40
NM_052821 NP_438172 P61964 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC001635 AAH01635 P61964
HQ448239 ADQ32719  
AK000552 BAA91248 P61964
AK024484 BAB15774 Q9H7J6
AJ011376 CAB66159 P61964

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens WDR5 NP_438172 M.musculus Wdr5 140858 Gene Info NP_543124 100
R.norvegicus Wdr5 362093   NP_001034123 100
A.gambiae AgaP_AGAP002019 1281099   XP_321036 92
A.gambiae AgaP_AGAP012731 1268560   XP_307121 92
D.melanogaster wds 53428   NP_524984 91
C.elegans tag-125 175474   NP_497749 70
A.thaliana AT3G49660 824128   NP_190535 67
N.crassa NCU03244 3879885   XP_963736 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)