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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMEM106B, transmembrane protein 106B
Sequence ID:NM_001134232
NM_018374
Entrez Gene ID:54664
Ensembl ID:ENSG00000106460

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 12271073 - 12273303

 Exon Info From UCSC:
NM_001134232
NM_018374

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5263860Full LengthBC033901transmembrane protein 106B
6066301Full LengthBC039741transmembrane protein 106B
5248476IncompleteBC028108transmembrane protein 106B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060844  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134232 NP_001127704    
NM_018374 NP_060844 Q9NUM4 DUF1356

Related Sequences

 
mRNAGenPeptSwissProt
BC028108 AAH28108 Q8N353
BC033901 AAH33901 Q9NUM4
BC039741 AAH39741 Q9NUM4
HQ447341 ADQ31827  
AK002135 BAA92099 Q9NUM4
AK223263 BAD96983 Q9NUM4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMEM106B NP_001127704 M.musculus Tmem106b 71900 Gene Info NP_082268 96
R.norvegicus Tmem106b 312132   NP_001004267 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)