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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EIF4A3, eukaryotic translation initiation factor 4A3
Sequence ID:NM_014740
Entrez Gene ID:9775
Ensembl ID:ENSG00000141543

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 78109172 - 78120943

 Exon Info From UCSC:
NM_014740

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2988931Full LengthBC003662eukaryotic translation initiation factor 4A, isoform 3
3452439Full LengthBC011151eukaryotic translation initiation factor 4A, isoform 3
3619386Full LengthBC004386eukaryotic translation initiation factor 4A, isoform 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055555  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_014740 NP_055555 P38919 EC 3.6.4.13 DEAD
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC003662 AAH03662 P38919 EC 3.6.4.13
BC004386 AAH04386 P38919 EC 3.6.4.13
BC011151 AAH11151 P38919 EC 3.6.4.13
D21853 BAA04879 P38919 EC 3.6.4.13
AK290608 BAF83297 P38919 EC 3.6.4.13
X79538 CAA56074 P38919 EC 3.6.4.13
CR456750 CAG33031 P38919 EC 3.6.4.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EIF4A3 NP_055555 M.musculus Eif4a3 192170 Gene Info NP_619610 99
A.gambiae AgaP_AGAP003089 1273765   XP_312776 88
C.elegans Y65B4A.6 190485   NP_490761 88
D.melanogaster eIF4AIII 40987   NP_649788 88
C.elegans F33D11.10 172258   NP_491703 87
N.crassa NCU01234 3877748   XP_961600 82
S.pombe SPAC1F5.10 2541602   NP_592863 78
A.thaliana EIF4A-III 821513   NP_188610 75
P.falciparum PFD1070w 812458   XP_001351530 66
S.cerevisiae FAL1 851584   NP_010304 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)