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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IFT140, intraflagellar transport 140 homolog (Chlamydomonas)
Sequence ID:NM_014714
RefSeqGene ID:NG_032783
Entrez Gene ID:9742
Ensembl ID:ENSG00000187535

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 1560430 - 1660692

 Exon Info From UCSC:
NM_014714

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5552740Full LengthBC035577intraflagellar transport 140 homolog (Chlamydomonas)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055529  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014714 NP_055529 Q96RY7 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC035577 AAH35577 Q96RY7
AB011162 BAA25516 Q96RY7
AB209020 BAD92257 Q59GT9
AK055133 BAG51475 B3KNW3
AK299035 BAG61110 B4DQZ8
AK299115 BAG61170 B4DR58
AL080069 CAB45696 Q9UG52

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IFT140 NP_055529 M.musculus Ift140 106633 Gene Info NP_598887 82
R.norvegicus LOC100362124 100362124   XP_002727774 82
A.gambiae AgaP_AGAP000686 1272408   XP_311215 39
D.melanogaster rempA 33230   NP_995608 38
C.elegans che-11 179666   NP_506047 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)