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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PPM1L, protein phosphatase, Mg2+/Mn2+ dependent, 1L
Sequence ID:NM_139245
Entrez Gene ID:151742
Ensembl ID:ENSG00000163590

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 160560000 - 160788816

NM_139245 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1500160473995160474494
501675160679523160679697
676837160783190160783351
8383052160786598160788812

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8143888Full LengthBC104885protein phosphatase 1 (formerly 2C)-like
8143890Full LengthBC104887protein phosphatase 1 (formerly 2C)-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_640338  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_139245 NP_640338 Q5SGD2 EC 3.1.3.16 PP2C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC104885 AAI04886 Q5SGD2 EC 3.1.3.16
BC104887 AAI04888 Q5SGD2 EC 3.1.3.16
AY337264 AAR00269 Q5SGD2 EC 3.1.3.16
AK055115 BAB70856 Q5SGD2 EC 3.1.3.16

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPM1L NP_640338 M.musculus Ppm1l 242083 Gene Info NP_848841 99
R.norvegicus Ppm1l 310506   NP_001101151 99
A.gambiae AgaP_AGAP008536 1277484   XP_316899 51
D.melanogaster CG7115 34069   NP_609154 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)