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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATP6V1G1, ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
Sequence ID:NM_004888
Entrez Gene ID:9550
Ensembl ID:ENSG00000136888

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 117350044 - 117360337

NM_004888 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1207117349993117350199
208308117354831117354931
3091610117359849117361150

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4246202Full LengthBC008452ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004879  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004888 NP_004879 O75348 V-ATPase_G

Related Sequences

 
mRNAGenPeptSwissProt
AF038954 AAC39868 O75348
BC008452 AAH08452 O75348
HQ447927 ADQ32411  
CR456971 CAG33252 O75348
CR542237 CAG47033 O75348

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP6V1G1 NP_004879 R.norvegicus Atp6v1g1 298103   NP_001100130 97
M.musculus Atp6v1g1 66290 Gene Info NP_077135 95
A.gambiae AgaP_AGAP004867 1275089   XP_314319 54
C.elegans vha-10 172216   NP_491641 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)