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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GFRA1, GDNF family receptor alpha 1
Sequence ID:NM_001145453
NM_005264
NM_145793
Entrez Gene ID:2674
Ensembl ID:ENSG00000151892

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q26.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 117823274 - 118032976

 Exon Info From UCSC:
NM_001145453
NM_005264
NM_145793

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4874042Full LengthBC014962GDNF family receptor alpha 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_665736  NP_005255  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145453 NP_001138925    
NM_005264 NP_005255 P56159 GDNF
NM_145793 NP_665736   GDNF

Related Sequences

 
mRNAGenPeptSwissProt
U95847 AAB71811 P56159
AF042080 AAB97371 P56159
AF038421 AAC39692 P56159
U97144 AAC51646 P56159
BC014962 AAH14962 P56159
DQ892210 ABM83136  
DQ895406 ABM86332  
AK292886 BAF85575 P56159
AK302914 BAH13842 B7Z856

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GFRA1 NP_005255 M.musculus Gfra1 14585 Gene Info NP_034409 94
R.norvegicus Gfra1 25454   NP_037091 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)