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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ABHD16A, Abhydrolase domain containing 16A
Sequence ID:NM_001177515
NM_021160
Entrez Gene ID:7920
Ensembl ID:ENSG00000204427

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 31654734 - 31671085

 Exon Info From UCSC:
NM_001177515
NM_021160

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4931559Full LengthBC031839HLA-B associated transcript 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066983  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177515 NP_001170986    
NM_021160 NP_066983 O95870 Abhydrolase_1

Related Sequences

 
mRNAGenPeptSwissProt
AF193047 AAG22475 O95870
BC031839 AAH31839 O95870
DQ891325 ABM82251  
DQ894509 ABM85435  
AK001207 BAA91553 O95870
AK023194 BAB14455 O95870
AK289469 BAF82158 A8K0A4
AK055255 BAG51491 B3KNX9
AK297712 BAH12652 O95870
AK303496 BAH13975 B7Z8I9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABHD16A NP_066983 M.musculus Abhd16a 193742 Gene Info NP_848707 96
R.norvegicus Abhd16a 361796   NP_997696 95
A.gambiae AgaP_AGAP005364 1276068   XP_315374 46
D.melanogaster CG1309 38519   NP_647880 45
C.elegans F37A4.1 175948   NP_498475 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)