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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MCF2, MCF.2 cell line derived transforming sequence
Sequence ID:NM_001099855
NM_001171876
NM_001171877
NM_001171878
NM_001171879
NM_005369
RefSeqGene ID:NG_016439
Entrez Gene ID:4168
Ensembl ID:ENSG00000101977

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq27Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 138664601 - 138724677

 Exon Info From UCSC:
NM_001099855
NM_001171876
NM_001171877
NM_001171878
NM_001171879
NM_005369

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063988Full LengthBC160052MCF.2 cell line derived transforming sequence

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005360  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001099855 NP_001093325    
NM_001171876 NP_001165347    
NM_001171877 NP_001165348    
NM_001171878 NP_001165349    
NM_001171879 NP_001165350    
NM_005369 NP_005360 P10911 PH
RhoGEF

Related Sequences

 
mRNAGenPeptSwissProt
J03639 AAA52172 P10911
BC160052 AAI60052  
AB085901 BAC41200 P10911
AB085902 BAC41201 P10911
AK313900 BAG36623 B2R9S6
AK296488 BAH12371 B7Z3Y5
AK296529 BAH12378 B7Z3Z2
AK302957 BAH13855 P10911
AK316416 BAH14787 P10911
X12556 CAA31069 P10911
X13230 CAA31617 P10911
AL117234 CAB55301 P10911

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MCF2 NP_001093325 R.norvegicus Mcf2 317598   XP_229172 78
M.musculus Mcf2 109904 Gene Info NP_573460 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)