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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GLYR1, glyoxylate reductase 1 homolog (Arabidopsis)
Sequence ID:NM_032569
Entrez Gene ID:84656
Ensembl ID:ENSG00000140632

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 4853203 - 4854787

 Exon Info From UCSC:
NM_032569

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5263991Full LengthBC047223cytokine-like nuclear factor n-pac
5265561Full LengthBC032855cytokine-like nuclear factor n-pac
5787345Full LengthBC064940cytokine-like nuclear factor n-pac
3454556IncompleteBC003693cytokine-like nuclear factor n-pac
4335264IncompleteBC022809cytokine-like nuclear factor n-pac
6015963IncompleteBC063039cytokine-like nuclear factor n-pac

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115958  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032569 NP_115958   PWWP
NAD_binding_2

Related Sequences

 
mRNAGenPeptSwissProt
AF217521 AAF67632 Q9NZ78
BC003693 AAH03693 Q49A26
BC032855 AAH32855 Q49A26
BC047223 AAH47223 Q49A26
BC064940 AAH64940 Q49A26
AF326966 AAK15524 Q49A26
AF244907 AAQ14242 Q49A26
AY352585 AAQ57265 Q49A26
AK296842 BAG59409 Q49A26

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GLYR1 NP_115958 M.musculus Glyr1 74022 Gene Info NP_001073282 99
R.norvegicus Glyr1 360477   NP_001007801 99
A.thaliana GLYR1 822139   NP_566768 50
A.gambiae GLYR1_ANOGA 1279367   XP_319082 36
D.melanogaster CG4747 192507   NP_001188767 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)