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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. FAU, Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed
Sequence ID:NM_001997
Entrez Gene ID:2197
Ensembl ID:ENSG00000149806

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 64888101 - 64889657

NM_001997 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
51846488809864888277
1852406488845264888507
2413856488897164889115
3864686488921064889292
4695796488956164889671

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5758816Full LengthBC033877Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001988  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001997 NP_001988   ubiquitin
Ribosomal_S30

Related Sequences

 
mRNAGenPeptSwissProt
BC033877 AAH33877 P35544
P62861
DQ892409 ABM83335  
DQ895622 ABM86548  
D28403 BAA05769  
AK026639 BAB15515 P35544
P62861
X65923 CAA46716 P35544
P62861
CR541974 CAG46772 P35544
P62861

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FAU NP_001988 M.musculus Gm9843 100039316 Gene Info XP_001472518 98
M.musculus Fau 14109 Gene Info NP_001153711 98
R.norvegicus Fau 29752   NP_001153704 98
R.norvegicus LOC100360647 100360647   XP_002729675 98
C.elegans rps-30 179154   NP_505007 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)