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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZNF394, Zinc finger protein 394
Sequence ID:NM_032164
Entrez Gene ID:84124
Ensembl ID:ENSG00000160908

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 99097712 - 99097888

NM_032164 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11615159909085499092253
151616429909633899096464
164322599909726099097876

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4641268Full LengthBC025241zinc finger protein 394
6007172Full LengthBC051847zinc finger protein 394

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115540  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032164 NP_115540 Q53GI3 zf-C2H2
KRAB
SCAN

Related Sequences

 
mRNAGenPeptSwissProt
BC017051 AAH17051 Q05DA6
BC025241 AAH25241 Q53GI3
BC051847 AAH51847 Q53GI3
AY642122 AAT67053 Q53GI3
EU446676 ABZ92205  
AK022360 BAB14021 Q53GI3
AK222948 BAD96668 Q53GI3
AJ297365 CAB95950 Q9NQ42

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZNF394 NP_115540 M.musculus Zkscan14 67235 Gene Info NP_075811 67
R.norvegicus Zfp394 252860   NP_663776 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)