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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GYS1, glycogen synthase 1 (muscle)
Sequence ID:NM_001161587
RefSeqGene ID:NG_012923
Entrez Gene ID:2997
Ensembl ID:ENSG00000104812

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 49472411 - 49496566

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2958297Full LengthBC003182glycogen synthase 1 (muscle)
3143019Full LengthBC002617glycogen synthase 1 (muscle)
3953692Full LengthBC007688glycogen synthase 1 (muscle)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002094  

Protein Infomation

NM_001161587 NP_001155059      
NM_002103 NP_002094 P13807 EC Glycogen_syn

Related Sequences

J04501 AAA88046 P13807 EC
U32573 AAB60385 P13807 EC
BC002617 AAH02617 P13807 EC
BC003182 AAH03182 P13807 EC
BC007688 AAH07688 P13807 EC
AK223579 BAD97299 Q53ER0  
AK291672 BAF84361 A8K6K7  
AK294349 BAH11741 B7Z255  
AK300369 BAH13272 B7Z6I6  
AK302738 BAH13792 B7Z806  
AK303712 BAH14026 B7Z8P0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens GYS1 NP_002094 M.musculus Gys1 14936 Gene Info NP_109603 97
R.norvegicus Gys1 690987   NP_001103085 97
D.melanogaster CG6904 41823   NP_731968 61
A.gambiae AgaP_AGAP002586 1273385   XP_312352 60
S.cerevisiae GSY2 850962   NP_013359 58
N.crassa NCU06687 3877149   XP_961002 58
S.cerevisiae GSY1 850569   NP_116670 57
C.elegans gsy-1 174924   NP_496736 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)