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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. WDHD1, WD repeat and HMG-box DNA binding protein 1
Sequence ID:NM_007086
NM_001008396
Entrez Gene ID:11169
Ensembl ID:ENSG00000198554

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 55407609 - 55493522

 Exon Info From UCSC:
NM_007086
NM_001008396

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6514641Full LengthBC063041WD repeat and HMG-box DNA binding protein 1
3346434IncompleteBC000622WD repeat and HMG-box DNA binding protein 1
3615423IncompleteBC005040WD repeat and HMG-box DNA binding protein 1
5403530IncompleteBC043349WD repeat and HMG-box DNA binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009017  NP_001008397  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008396 NP_001008397   WD40
NM_007086 NP_009017 O75717 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC000622 AAH00622 O75717
BC005040 AAH05040 Q05DR3
BC043349 AAH43349 O75717
BC063041 AAH63041 O75717
AY517556 AAT44529 Q5GJ66
AK293005 BAF85694 A8KAE0
AK001538 BAG50934 B3KMC2
AK001585 BAG50944 B3KMD2
AK001620 BAG50951 B3KMD9
AJ006266 CAA06932 O75717

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens WDHD1 NP_009017 M.musculus Wdhd1 218973 Gene Info NP_766186 84
R.norvegicus Wdhd1 305827   NP_001100725 82
D.melanogaster CG13350 36551   NP_610921 34
A.gambiae AgaP_AGAP007423 1269764   XP_308414 32
A.thaliana AT3G42660 823286   NP_189852 28
C.elegans F17C11.10 179521   NP_505799 28
S.pombe mcl1 2543387   NP_594128 28
N.crassa NCU08484 3879303   XP_963155 26
S.cerevisiae CTF4 856254   NP_015461 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)