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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PLD1, phospholipase D1, phosphatidylcholine-specific
Sequence ID:NM_001130081
NM_002662
RefSeqGene ID:NG_029851
Entrez Gene ID:5337
Ensembl ID:ENSG00000075651

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q26Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 171318194 - 171528228

 Exon Info From UCSC:
NM_001130081
NM_002662

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6068382Full LengthBC068976phospholipase D1, phosphatidylcholine-specific

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002653  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001130081 NP_001123553      
NM_002662 NP_002653 Q13393 EC 3.1.4.4 PH
PLDc
PX

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U38545 AAB49031 Q13393 EC 3.1.4.4
BC068976 AAH68976 Q13393 EC 3.1.4.4
HQ257981 ADR82735    
AB209907 BAD93144 Q59EA4  
AJ276230 CAB76564 Q13393 EC 3.1.4.4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PLD1 NP_001123553 M.musculus Pld1 18805 Gene Info NP_001157528 92
R.norvegicus Pld1 25096   NP_112254 91
C.elegans pld-1 173876   NP_494939 48
A.thaliana PLDP1 820932   NP_188302 41
A.thaliana PLDP2 819730   NP_187214 41
S.cerevisiae SPO14 853902   NP_012956 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta