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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCM2L, cerebral cavernous malformation 2-like
Sequence ID:NM_080625
Entrez Gene ID:140706
Ensembl ID:ENSG00000101331

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 30598247 - 30619984

NM_080625 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1433059824430598286
442113060270630602873
2122953060560230605685
2964793060578130605964
4809463060674530607211
94710823061046230610597
108312123061679730616926
121313513061750230617640
135225323061880330619983

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5182496Full LengthBC030254chromosome 20 open reading frame 160

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080625 NP_542192    

Related Sequences

 
mRNAGenPeptSwissProt
BC030254 AAH30254 Q9NUG4
BC032455 AAH32455 Q9NUG4
AK057090 BAB71363 Q9NUG4
AK125588 BAG54219 B3KWQ7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C20orf160 NP_542192 M.musculus BC020535 228788 Gene Info NP_663511 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)