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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MRPS2, mitochondrial ribosomal protein S2
Sequence ID:NM_016034
NR_051967
NR_051968
NR_051969
NR_051970
Entrez Gene ID:51116
Ensembl ID:ENSG00000122140

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 138392552 - 138396519

NM_016034 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1117138392482138392598
118243138392843138392968
244373138393689138393818
3741504138395387138396517

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3534388Full LengthBC008017mitochondrial ribosomal protein S2
3924671Full LengthBC013108mitochondrial ribosomal protein S2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057118  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016034 NP_057118 Q9Y399 Ribosomal_S2

Related Sequences

 
mRNAGenPeptSwissProt
AF151849 AAD34086 Q9Y399
BC004905 AAH04905 Q9Y399
BC008017 AAH08017 Q9Y399
BC013108 AAH13108 Q9Y399
AB055388 BAB62529 Q9Y399

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPS2 NP_057118 M.musculus Mrps2 118451 Gene Info NP_536700 73
R.norvegicus Mrps2 362094   NP_001102046 71
D.melanogaster mRpS2 33688   NP_523473 61
A.gambiae AgaP_AGAP011886 1280773   XP_320639 60
C.elegans T23B12.3 179229   NP_505180 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)