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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CCDC78, coiled-coil domain containing 78
Sequence ID:NM_173476
NM_001031737
RefSeqGene ID:NG_032932
Entrez Gene ID:124093
Ensembl ID:ENSG00000162004

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 774541 - 776437


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5177109Full LengthBC042110coiled-coil domain containing 78
5181942IncompleteBC031561coiled-coil domain containing 78

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001031737 NP_001026907 A2IDD5  

Related Sequences

 
mRNAGenPeptSwissProt
BC042110 AAH42110 A2IDD5
AY439221 AAR13900 A2IDD5
AK091831 BAC03757 A2IDD5
AK127495 BAC87006 Q6ZSE7
AK128538 BAC87488 A2IDD5
AK298111 BAG60396 A2IDD5
AK303991 BAG64908 A2IDD5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCDC78 NP_001026907 M.musculus Ccdc78 381077 Gene Info NP_001159401 60
R.norvegicus RGD1560244 302996   XP_002727776 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)