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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TBX5, T-box 5
Sequence ID:NM_000192
NM_080717
NM_181486
NM_080718
RefSeqGene ID:NG_007373
Entrez Gene ID:6910
Ensembl ID:ENSG00000089225

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HOLT-ORAM SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 114793186 - 114846192

 Exon Info From UCSC:
NM_000192
NM_080717
NM_181486
NM_080718

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5204163Full LengthBC027942T-box 5
4042787IncompleteBC011028T-box 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000183  NP_852259  NP_542448  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000192 NP_000183 Q99593 T-box
NM_080717 NP_542448   T-box
NM_181486 NP_852259 Q99593 T-box

Related Sequences

 
mRNAGenPeptSwissProt
U89353 AAC04619 Q99593
U80987 AAC51644 Q99593
AF221714 AAF34659 Q99593
BC027942 AAH27942 Q99593
EU446658 ABZ92187  
AB051068 BAB55448 Q96TB0
AK290611 BAF83300 A8K3J6
AK300251 BAG62017 B4DTK5
Y09445 CAA70592 Q99593

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBX5 NP_852259 M.musculus Tbx5 21388 Gene Info NP_035667 96
R.norvegicus Tbx5 304514   NP_001009964 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)