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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ASIC5, acid-sensing (proton-gated) ion channel family member 5
Sequence ID:NM_017419
Entrez Gene ID:51802
Ensembl ID:ENSG00000256394

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q32.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 156750880 - 156787425

NM_017419 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1318156750880156751197
319410156752975156753066
411579156757840156758008
580636156759964156760020
637784156763358156763505
785934156764832156764981
9351060156773342156773467
10611298156775228156775465
12991605156784599156784905
16061692156787338156787424

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014985Full LengthBC146497amiloride-sensitive cation channel 5, intestinal
100014383BC140356amiloride-sensitive cation channel 5, intestinal

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059115  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017419 NP_059115 Q9NY37 ASC

Related Sequences

 
mRNAGenPeptSwissProt
BC140356 AAI40357  
BC146497 AAI46498  
AJ252011 CAB85607 Q9NY37

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ASIC5 NP_059115 M.musculus Accn5 58170 Gene Info NP_067345 79
R.norvegicus Accn5 63866   NP_071563 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)