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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPL15, ribosomal protein L15
Sequence ID:NM_001253379
NM_001253380
NM_001253382
NM_001253383
NM_001253384
NM_002948
Entrez Gene ID:6138
Ensembl ID:ENSG00000174748

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 23958649 - 23962332

Transcript StartTranscript EndChromosomal Start Chromosomal End
1262395863823958663
272082395934023959521
2093452395993023960066
34619892396068623962329

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2901238Full LengthBC014837ribosomal protein L15
4093343Full LengthBC068198ribosomal protein L15
4390593Full LengthBC071672ribosomal protein L15
5458912Full LengthBC081565ribosomal protein L15
30371842Full LengthBC070328ribosomal protein L15
3961042IncompleteBC030575ribosomal protein L15

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002939  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001253379 NP_001240308    
NM_001253380 NP_001240309    
NM_001253382 NP_001240311    
NM_001253383 NP_001240312    
NM_001253384 NP_001240313    
NM_002948 NP_002939 P61313 Ribosomal_L15e

Related Sequences

 
mRNAGenPeptSwissProt
L25899 AAA36583 P61313
AF283772 AAG15591 P61313
AF279903 AAG44837 P61313
BC014837 AAH14837 P61313
BC068198 AAH68198 P61313
BC070328 AAH70328 P61313
BC071672 AAH71672 P61313
BC081565 AAH81565 Q642I1
AY347528 AAQ24859 P61313
BT019672 AAV38478 P61313
AK290694 BAF83383 P61313
AK292000 BAF84689 P61313
AK293709 BAG57142 B4DEN1
AK297091 BAG59606 B4DLP4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL15 NP_002939 M.musculus Rpl15 66480 Gene Info NP_079862 100
R.norvegicus Rpl15 245981   NP_620814 100
C.elegans rpl-15 176891   NP_499964 76
A.gambiae RL15_ANOGA 1275723   XP_315009 74
D.melanogaster RpL15 3354918   NP_001015155 74
N.crassa NCU01776 3873305   XP_957199 73
S.pombe rpl15 2539470   NP_588438 73
S.cerevisiae RPL15A 850716   NP_013129 72
S.cerevisiae RPL15B 855150   NP_013840 72
S.pombe rpl1502 2542370   NP_593663 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)