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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SPATC1L, spermatogenesis and centriole associated 1-like
Sequence ID:NM_001142854
NM_032261
Entrez Gene ID:84221
Ensembl ID:ENSG00000160284

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 47581074 - 47604373

 Exon Info From UCSC:
NM_001142854
NM_032261

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3949357Full LengthBC009497chromosome 21 open reading frame 56
6171749Full LengthBC065570chromosome 21 open reading frame 56
6646538Full LengthBC084577chromosome 21 open reading frame 56
7939649Full LengthBC093804chromosome 21 open reading frame 56
8327761Full LengthBC112293chromosome 21 open reading frame 56

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142854 NP_001136326 Q9H0A9  
NM_032261 NP_115637    

Related Sequences

 
mRNAGenPeptSwissProt
BC009497 AAH09497 Q9H0A9
BC065570 AAH65570 Q9H0A9
BC084577 AAH84577 Q9H0A9
BC093804 AAH93804 Q9H0A9
BC112293 AAI12294 Q9H0A9
HQ258090 ADR82844  
AK304535 BAG65335 Q9H0A9
AL136871 CAB66805 Q9H0A9
CR533451 CAG38482 Q9H0A9
AM393702 CAL38578  
AM393719 CAL38595  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C21orf56 NP_001136326 M.musculus 1700027D21Rik 76573 Gene Info NP_083937 86
R.norvegicus LOC499418 499418   NP_001019467 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)