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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CBX3, Chromobox homolog 3
Sequence ID:NM_007276
NM_016587
Entrez Gene ID:11335
Ensembl ID:ENSG00000122565

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 26245993 - 26252971

 Exon Info From UCSC:
NM_007276
NM_016587

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3450099Full LengthBC000954chromobox homolog 3 (HP1 gamma homolog, Drosophila)
4045143IncompleteBC014380chromobox homolog 3 (HP1 gamma homolog, Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057671  NP_009207  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007276 NP_009207   Chromo
Chromo_shadow
NM_016587 NP_057671   Chromo
Chromo_shadow

Related Sequences

 
mRNAGenPeptSwissProt
U26312 AAB48101 Q13185
AF136630 AAF62370 Q13185
BC000954 AAH00954 Q13185
BC014380 AAH14380 Q13185
EU832023 ACE86685  
EU831928 ACE87369  
AB030905 BAA83340 Q13185

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CBX3 NP_057671 M.musculus Gm10068 100504483   XP_003084495 100
M.musculus Cbx3 12417 Gene Info NP_031650 100
R.norvegicus LOC100360260 100360260   XP_002728446 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)