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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RAB43, RAB43, member RAS oncogene family
Sequence ID:NM_001204883
NM_001204884
NM_001204885
NM_001204886
NM_001204887
NM_001204888
NM_198490
Entrez Gene ID:339122
Ensembl ID:ENSG00000172780

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 46656786 - 46658315

Transcript StartTranscript EndChromosomal Start Chromosomal End
13772128806417128810188
37733956128813828128814011
39574447128840128128840618

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4873224Full LengthBC062319RAB43, member RAS oncogene family
4874664IncompleteBC073812RAB43, member RAS oncogene family

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204883 NP_001191812    
NM_001204884 NP_001191813    
NM_001204885 NP_001191814    
NM_001204886 NP_001191815    
NM_001204887 NP_001191816    
NM_001204888 NP_001191817    
NM_198490 NP_940892 Q86YS6 Ras

Related Sequences

 
mRNAGenPeptSwissProt
BC062319 AAH62319 Q86YS6
AY166852 AAO17291 Q86YS6
AK291014 BAF83703 Q86YS6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB43 NP_001191812 R.norvegicus Rab43 500249   NP_001019502 93
M.musculus Rab43 69834 Gene Info NP_001034483 92
A.gambiae AgaP_AGAP007096 1270007   XP_308662 62
D.melanogaster Rab-RP3 38930   NP_523970 57
C.elegans rab-19 178301   NP_502576 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)