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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RPS14, ribosomal protein S14
Sequence ID:NM_001025070
NM_001025071
NM_005617
Entrez Gene ID:6208
Ensembl ID:ENSG00000164587

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
MACROCYTIC ANEMIA, REFRACTORY, DUE TO 5Q DELETION, SOMATICIRF1

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31-q33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 149823848 - 149829298

 Exon Info From UCSC:
NM_001025070
NM_001025071
NM_005617

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2900907Full LengthBC006784ribosomal protein S14
2967098Full LengthBC001126ribosomal protein S14
3448752Full LengthBC003401ribosomal protein S14
3856643Full LengthBC020515ribosomal protein S14
30334486Full LengthBC091474ribosomal protein S14

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020242  NP_005608  NP_001020241  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025070 NP_001020241 P62263 Ribosomal_S11
NM_001025071 NP_001020242 P62263 Ribosomal_S11
NM_005617 NP_005608 P62263 Ribosomal_S11

Related Sequences

 
mRNAGenPeptSwissProt
BC001126 AAH01126 P62263
BC003401 AAH03401 P62263
BC006784 AAH06784 P62263
BC020515 AAH20515 P62263
BC091474 AAH91474 P62263
DQ890964 ABM81890  
DQ894136 ABM85062  
AK312179 BAG35112 P62263

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPS14 NP_005608 M.musculus Rps14 20044 Gene Info NP_065625 100
R.norvegicus Rps14 29284   NP_073163 99
A.gambiae RS14B_ANOGA 1273618   XP_312618 89
A.gambiae RS14A_ANOGA 1272446   XP_311181 89
A.thaliana AT3G11510 820324   NP_187758 87
C.elegans rps-14 176006   NP_498572 87
D.melanogaster RpS14a 47218   NP_524884 87
D.melanogaster RpS14b 47219   NP_536352 87
N.crassa NCU07830 3879099   XP_962951 87
A.thaliana AT3G52580 824424   NP_190826 86
A.thaliana AT2G36160 818188   NP_181158 86
S.pombe rps1401 2540817   NP_595737 84
S.pombe rps1401 2543458   NP_594187 84
S.cerevisiae RPS14B 853248   NP_012344 83
S.cerevisiae RPS14A 850397   NP_009960 83
P.falciparum PFE0810c 812977   XP_001351719 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)