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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RPL19, ribosomal protein L19
Sequence ID:NM_000981
Entrez Gene ID:6143
Ensembl ID:ENSG00000108298

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 37356570 - 37360980

NM_000981 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1673735653537356601
681743735746537357571
1752973735856937358691
2984183735924137359361
4195293736032937360439
5307323736077737360979

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2961653Full LengthBC000530ribosomal protein L19
3010178Full LengthBC013016ribosomal protein L19
5287470Full LengthBC066315ribosomal protein L19
6457109Full LengthBC062709ribosomal protein L19
30721753Full LengthBC095445ribosomal protein L19

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000972  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000981 NP_000972 P84098 Ribosomal_L19e

Related Sequences

 
mRNAGenPeptSwissProt
S56985 AAB25672 P84098
BC000530 AAH00530 P84098
BC013016 AAH13016 P84098
BC062709 AAH62709 P84098
BC066315 AAH66315 P84098
BC095445 AAH95445 P84098
AY157980 AAN76335 Q8IWR8
DQ891377 ABM82303  
EU832047 ACE86709  
EU831953 ACE87394  
HQ447194 ADQ31681  
AB055766 BAB62860  
AK223082 BAD96802 Q53G49
AK311858 BAG34799 P84098
X63527 CAA45090 P84098
BX537435 CAD97677 P84098

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL19 NP_000972 M.musculus Rpl19 19921 Gene Info NP_033104 100
R.norvegicus Rpl19 81767   NP_112365 100
D.melanogaster RpL19 37995   NP_476631 76
A.gambiae AgaP_AGAP004422 1274564   XP_313705 74
A.thaliana AT4G02230 828099   NP_192132 71
A.thaliana emb2386 839407   NP_171777 69
A.thaliana AT3G16780 820931   NP_188300 69
C.elegans rpl-19 172201   NP_491608 66
N.crassa NCU05804 3876195   XP_960064 63
S.pombe rpl1901 2540870   NP_596715 62
S.pombe rpl1902 2539178   NP_587807 62
P.falciparum PFF0700c 3885805   XP_966131 61
S.cerevisiae RPL19B 852254   NP_009526 58
S.cerevisiae RPL19A 852379   NP_009641 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)