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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LDHD, lactate dehydrogenase D
Sequence ID:NM_153486
NM_194436
Entrez Gene ID:197257
Ensembl ID:ENSG00000166816

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 75145793 - 75150665

 Exon Info From UCSC:
NM_153486
NM_194436

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5162826Full LengthBC040279lactate dehydrogenase D
5762691Full LengthBC047902lactate dehydrogenase D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_919417  NP_705690  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_153486 NP_705690 Q86WU2 EC 1.1.2.4 FAD_binding_4
FAD-oxidase_C
NM_194436 NP_919417     FAD_binding_4
FAD-oxidase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC040279 AAH40279 Q86WU2 EC 1.1.2.4
BC047902 AAH47902 Q86WU2 EC 1.1.2.4
AY092767 AAM50322 Q86WU2 EC 1.1.2.4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LDHD NP_705690 R.norvegicus Ldhd 307858   NP_001008893 87
M.musculus Ldhd 52815 Gene Info NP_081846 85
C.elegans F32D8.12 179506   NP_001023872 53
A.thaliana AT5G06580 830546   NP_568170 43
N.crassa NCU02179 3880398   XP_964249 42
S.cerevisiae DLD1 851380   NP_010107 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)