Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BMI1, BMI1 polycomb ring finger oncogene
Sequence ID:NM_005180
Entrez Gene ID:648
Ensembl ID:ENSG00000168283

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10p11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 22615410 - 22619279

NM_005180 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16202261000522610624
6217512261535922615489
7528482261581822615914
8499042261652322616578
9059552261667022616720
95610642261687822616986
106511102261706222617107
111112092261752822617626
121012902261797622618056
129135662261814122620416

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4138748Full LengthBC011652BMI1 polycomb ring finger oncogene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005171  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204062 NP_001190991    
NM_005180 NP_005171 P35226 zf-C3HC4

Related Sequences

 
mRNAGenPeptSwissProt
L13689 AAA19873 P35226
BC011652 AAH11652 P35226
BT019450 AAV38257 Q5U0M5
AK313235 BAG36046 P35226
CR456911 CAG33192 Q6IB93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta