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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GHDC, GH3 domain containing
Sequence ID:NM_001142622
NM_001142623
NM_032484
NR_024573
Entrez Gene ID:84514
Ensembl ID:ENSG00000167925

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 40341719 - 40345612

 Exon Info From UCSC:
NM_001142622
NM_001142623
NM_032484

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3847323Full LengthBC022784GH3 domain containing

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115873  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142622 NP_001136094    
NM_001142623 NP_001136095    
NM_032484 NP_115873 Q8N2G8 GH3

Related Sequences

 
mRNAGenPeptSwissProt
BC022784 AAH22784 Q8N2G8
AF316997 AAK15472 Q8N2G8
AK074700 BAC11146 Q8N2G8
AK075277 BAC11514 Q8N2G8
AK122777 BAG53722 B3KVB0
AK298933 BAG61036 B4DQS4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GHDC NP_115873 R.norvegicus Ghdc 303542   XP_220981 75
M.musculus Ghdc 80860 Gene Info NP_114077 73
A.thaliana BRU6 829893   NP_195455 30
A.thaliana GH3.1 815985   NP_179101 28
A.thaliana GH3.3 816849   NP_179898 28
A.thaliana GH3.4 842240   NP_176159 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)