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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NUDCD1, NudC domain containing 1
Sequence ID:NM_032869
NM_001128211
Entrez Gene ID:84955
Ensembl ID:ENSG00000120526

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 110254903 - 110346471

 Exon Info From UCSC:
NM_032869
NM_001128211

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3449287Full LengthBC000967NudC domain containing 1
5272186Full LengthBC031258NudC domain containing 1
6059975Full LengthBC043406NudC domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_116258  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001128211 NP_001121683    
NM_032869 NP_116258 Q96RS6 CS

Related Sequences

 
mRNAGenPeptSwissProt
BC000967 AAH00967 Q96RS6
BC031258 AAH31258 Q96RS6
BC043406 AAH43406 Q96RS6
AF283301 AAK73017 Q96RS6
AF283302 AAM69373 Q96RS6
AF521133 AAQ08823 Q96RS6
AK027897 BAB55439 Q96RS6
AK301278 BAG62838 Q96RS6
AL832317 CAD38612 Q96RS6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NUDCD1 NP_116258 M.musculus Nudcd1 67429 Gene Info NP_001107026 90
R.norvegicus Nudcd1 362906   NP_001124033 90
A.gambiae AgaP_AGAP000648 1272452   XP_311171 29
C.elegans C44E4.5 172067   NP_491406 27
D.melanogaster CG10347 32141   NP_727572 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)