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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IFI16, interferon, gamma-inducible protein 16
Sequence ID:NM_001206567
NM_005531
RefSeqGene ID:NG_029141
Entrez Gene ID:3428
Ensembl ID:ENSG00000163565

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 158979711 - 159024938


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3914632Full LengthBC017059interferon, gamma-inducible protein 16

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005522  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001206567 NP_001193496    
NM_005531 NP_005522   PAAD_DAPIN
HIN

Related Sequences

 
mRNAGenPeptSwissProt
M63838 AAA58683 Q16666
AF208043 AAF20997 Q16666
BC017059 AAH17059 Q16666
AY138863 AAM96005 Q16666
DQ891062 ABM81988  
DQ894242 ABM85168  
AK094968 BAC04462 Q16666
AB208989 BAD92226 Q16666
AK296228 BAG58950 B4DJT8

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)