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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SDR9C7, short chain dehydrogenase/reductase family 9C, member 7
Sequence ID:NM_148897
Entrez Gene ID:121214
Ensembl ID:ENSG00000170426

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 57316937 - 57328189

NM_148897 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18975731693757317833
89810615732317357323336
106213205732400957324267
132117655732774457328188

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069057Full LengthBC101551short chain dehydrogenase/reductase family 9C, member 7
8069059Full LengthBC101553short chain dehydrogenase/reductase family 9C, member 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_683695  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_148897 NP_683695 Q8NEX9 adh_short

Related Sequences

 
mRNAGenPeptSwissProt
BC101551 AAI01552 Q8NEX9
BC101553 AAI01554 Q8NEX9
AY044434 AAK95856 Q8NEX9
AK122782 BAG53726 Q8NEX9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SDR9C7 NP_683695 R.norvegicus Sdr9c7 259235   XP_343225 87
M.musculus Sdr9c7 70061 Gene Info NP_081577 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)