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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHN1, chimerin 1
Sequence ID:NM_001025201
NM_001206602
NM_001822
NR_038133
RefSeqGene ID:NG_012642
Entrez Gene ID:1123
Ensembl ID:ENSG00000128656

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
DUANE RETRACTION SYNDROME 2 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 175664222 - 175870092

 Exon Info From UCSC:
NM_001025201
NM_001822

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3871858Full LengthBC011393chimerin (chimaerin) 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020372  NP_001813  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025201 NP_001020372 P15882 SH2
C1_1
RhoGAP
NM_001206602 NP_001193531    
NM_001822 NP_001813 P15882 SH2
C1_1
RhoGAP

Related Sequences

 
mRNAGenPeptSwissProt
BC011393 AAH11393 P15882
DQ893784 ABM84710  
DQ890613 ABM92230  
AB209788 BAD93025 Q59EM3
AK289941 BAF82630 P15882
AK055060 BAG51458 P15882
AK300890 BAG62531 P15882
X51408 CAA35769 Q6IBE0
P15882
Z22641 CAA80354 P15882
CR456864 CAG33145 Q6IBE0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHN1 NP_001813 M.musculus Chn1 108699 Gene Info NP_001106717 96
D.melanogaster RhoGAP5A 31473   NP_727007 45
A.gambiae AgaP_AGAP003026 1272926   XP_311850 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta