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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RBMX, RNA binding motif protein, X-linked
Sequence ID:NM_001164803
NM_002139
NR_028476
NR_028477
RefSeqGene ID:NG_012918
Entrez Gene ID:27316
Ensembl ID:ENSG00000147274

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq26.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 135955607 - 135962884

 Exon Info From UCSC:
NM_001164803
NM_002139

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3010123Full LengthBC006550RNA binding motif protein, X-linked
3010123Full LengthBC007435RNA binding motif protein, X-linked

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002130  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164803 NP_001158275    
NM_002139 NP_002130 P38159 RRM_1
RBM1CTR

Related Sequences

 
mRNAGenPeptSwissProt
BC006550 AAH06550 P38159
BC007435 AAH07435 P38159
AY464692 AAR28036 P38159
DQ893211 ABM84137  
DQ896540 ABM87539  
AK096015 BAC04674 P38159
AK091520 BAG52377 B3KRG5
AK304573 BAG65364 B4E352
AK304868 BAG65606 P38159
Z23064 CAA80599 P38159

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RBMX NP_002130 M.musculus Rbmx 19655 Gene Info NP_001160095 99
R.norvegicus Rbmx 302855   NP_001020834 98
A.thaliana AT5G04280 830307   NP_196048 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)