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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. PDZRN4, PDZ domain containing ring finger 4
Sequence ID:NM_001164595
Entrez Gene ID:29951
Ensembl ID:ENSG00000165966

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 41831573 - 41967555

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939589Full LengthBC093744PDZ domain containing ring finger 4
7939591Full LengthBC093746PDZ domain containing ring finger 4
5767589IncompleteBC040922PDZ domain containing ring finger 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037509  

Protein Infomation

NM_001164595 NP_001158067 Q6ZMN7  
NM_013377 NP_037509   PDZ

Related Sequences

BC040922 AAH40922 Q6ZMN7
BC093744 AAH93744 Q6ZMN7
BC093746 AAH93746 Q6ZMN7
AK131554 BAD18688 Q6ZMN7
AK094690 BAG52914 B3KT02
AK294431 BAG57676 B4DG65
AK294535 BAG57742 B4DGD1
AL133067 CAB61390 Q6ZMN7
BX640695 CAE45818 Q6ZMN7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens PDZRN4 NP_001158067 R.norvegicus Pdzrn4 315250   NP_001101577 89
M.musculus Pdzrn4 239618 Gene Info NP_001158065 82
D.melanogaster Slip1 43809   NP_651933 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)