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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UBR3, ubiquitin protein ligase E3 component n-recognin 3 (putative)
Sequence ID:NM_172070
Entrez Gene ID:130507
Ensembl ID:ENSG00000144357

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 170871312 - 170940615

 Exon Info From UCSC:
NM_172070

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172070 NP_742067 Q6ZT12  

Related Sequences

 
mRNAGenPeptSwissProt
AB095944 BAC23120 Q6ZT12
AK126998 BAC86783 Q6ZT12
AK127553 BAC87032 Q6ZT12
AK128490 BAC87462 Q6ZT12
AK303062 BAG64179 Q6ZT12
AL834144 CAD38857 Q6ZT12
CR749469 CAH18299 Q68DC1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBR3 NP_742067 M.musculus Ubr3 68795 Gene Info NP_808451 95
R.norvegicus RGD1565257 311115   NP_001128022 94
D.melanogaster CG42593 31713   NP_572428 40
A.gambiae AgaP_AGAP000384 1271868   XP_310723 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)