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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MTDH, metadherin
Sequence ID:NM_178812
Entrez Gene ID:92140
Ensembl ID:ENSG00000147649

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 98656515 - 98738541

 Exon Info From UCSC:
NM_178812

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5298467Full LengthBC045642metadherin
2989261IncompleteBC001815metadherin
4079105IncompleteBC023994metadherin
4124124IncompleteBC009324metadherin
4859424IncompleteBC014977metadherin
5089169IncompleteBC022825metadherin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178812 NP_848927 Q86UE4  

Related Sequences

 
mRNAGenPeptSwissProt
BC009324 AAH09324 Q86UE4
BC014977 AAH14977 Q86UE4
BC045642 AAH45642 Q86UE4
AY082966 AAL92861 Q86UE4
AF411226 AAO65771 Q86UE4
AF501310 AAP30791 Q86UE4
AY974040 AAX84832 Q86UE4
JF432755 ADZ15972  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MTDH NP_848927 M.musculus Mtdh 67154 Gene Info NP_080278 92
R.norvegicus Mtdh 170910   NP_596889 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)