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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDZD3, PDZ domain containing 3
Sequence ID:NM_001168468
NM_024791
NR_033122
Entrez Gene ID:79849
Ensembl ID:ENSG00000172367

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 119056183 - 119060469

 Exon Info From UCSC:
NM_001168468
NM_024791

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5186364Full LengthBC029042PDZ domain containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079067  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001168468 NP_001161940    
NM_024791 NP_079067   PDZ

Related Sequences

 
mRNAGenPeptSwissProt
BC029042 AAH29042 Q86UT5
AY047359 AAL10686 Q86UT5
AK026409 BAB15474 Q86UT5
AK091966 BAC03780 Q86UT5
AB094096 BAC76050 Q86UT5
AK298333 BAG60582 B4DPH0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDZD3 NP_001161940 M.musculus Pdzd3 170761 Gene Info NP_573489 82
R.norvegicus Pdzd3 500986   XP_576397 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)