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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. B4GALNT2, beta-1,4-N-acetyl-galactosaminyl transferase 2
Sequence ID:NM_001159387
NM_001159388
NM_153446
Entrez Gene ID:124872
Ensembl ID:ENSG00000167080

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 47210328 - 47247122

 Exon Info From UCSC:
NM_001159387
NM_001159388
NM_153446

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322727Full LengthBC113675beta-1,4-N-acetyl-galactosaminyl transferase 2
8322729Full LengthBC113677beta-1,4-N-acetyl-galactosaminyl transferase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_703147  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159387 NP_001152859    
NM_001159388 NP_001152860    
NM_153446 NP_703147 Q8NHY0 Glycos_transf_2

Related Sequences

 
mRNAGenPeptSwissProt
BC113675 AAI13676 Q8NHY0
BC113677 AAI13678 Q8NHY0
AF510036 AAM34756 Q8NHY0
S83275 AAN86706 Q8IVI2
HQ258321 ADR83075  
HQ258467 ADR83221  
AK302876 BAG64056 B4DZE4
AJ517770 CAD57148 Q8NHY0
AJ517771 CAD57149 Q8NHY0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens B4GALNT2 NP_703147 M.musculus B4galnt2 14422 Gene Info NP_032107 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)