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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. IFITM3, interferon induced transmembrane protein 3
Sequence ID:NM_021034
NR_049759
RefSeqGene ID:NG_032755
Entrez Gene ID:10410
Ensembl ID:ENSG00000142089

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 319760 - 320858

NM_021034 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11328319672319989
329678320564320913

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2986145Full LengthBC006794interferon induced transmembrane protein 3 (1-8U)
4075453Full LengthBC008417interferon induced transmembrane protein 3 (1-8U)
4282809Full LengthBC022439interferon induced transmembrane protein 3 (1-8U)
30401041Full LengthBC070243interferon induced transmembrane protein 3 (1-8U)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066362  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021034 NP_066362 Q01628 CD225

Related Sequences

 
mRNAGenPeptSwissProt
BC006794 AAH06794 Q01628
BC008417 AAH08417 Q01628
BC022439 AAH22439 Q01628
BC070243 AAH70243 Q01628
BT006892 AAP35538 Q01628
DQ891098 ABM82024  
DQ894280 ABM85206  
AK292173 BAF84862 Q01628
X57352 CAA40626 Q01628
AM392723 CAL37601 Q01628
AM393694 CAL38570  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IFITM3 NP_066362 R.norvegicus Ifitm7 288244   XP_221637 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)