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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TPT1, tumor protein, translationally-controlled 1
Sequence ID:NM_003295
Entrez Gene ID:7178
Ensembl ID:ENSG00000133112

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 45911312 - 45915318

NM_003295 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12204591130345911522
2213374591279445912910
3384434591363145913736
4446344591412845914318
6357084591484645914919
7098294591517645915296

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2899964Full LengthBC003352tumor protein, translationally-controlled 1
3880559Full LengthBC012431tumor protein, translationally-controlled 1
4281364Full LengthBC022436tumor protein, translationally-controlled 1
6058799Full LengthBC052333tumor protein, translationally-controlled 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003286  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003295 NP_003286 P13693 TCTP

Related Sequences

 
mRNAGenPeptSwissProt
BC003352 AAH03352 P13693
BC012431 AAH12431 P13693
BC022436 AAH22436 Q8TBK7
BC040008 AAH40008 Q86YH5
BC052333 AAH52333 P13693
AY117678 AAM51565 P13693
AY334563 AAQ01550 P13693
JF432827 ADZ16044  
AK312951 BAG35792 P13693
AK296587 BAG59206 B4DKJ4
AK296952 BAG59498 B4DLD6
X16064 CAA34200 P13693
CR457036 CAG33317 P13693

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TPT1 NP_003286 M.musculus Tpt1 22070 Gene Info NP_033455 96
R.norvegicus Tpt1 116646   NP_446319 96
D.melanogaster Tctp 41341   NP_650048 51
S.pombe p23fy 2542475   NP_594328 51
A.gambiae TCTP_ANOGA 1273293   XP_312257 50
N.crassa NCU06464 3873476   XP_957355 47
S.cerevisiae TMA19 853809   NP_012867 43
C.elegans tct-1 172944   NP_492767 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)