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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CKS1B, CDC28 protein kinase regulatory subunit 1B
Sequence ID:NM_001826
RefSeqGene ID:NG_029028
Entrez Gene ID:1163
Ensembl ID:ENSG00000173207

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 154947195 - 154951716

NM_001826 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1163154947117154947279
164291154950462154950589
292815154951200154951723

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3162564Full LengthBC015629CDC28 protein kinase regulatory subunit 1B
4110344Full LengthBC007751CDC28 protein kinase regulatory subunit 1B
4738841Full LengthBC070319CDC28 protein kinase regulatory subunit 1B
6494754Full LengthBC070320CDC28 protein kinase regulatory subunit 1B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001817  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001826 NP_001817 P61024
Q5T178
CKS

Related Sequences

 
mRNAGenPeptSwissProt
BC007751 AAH07751 P61024
Q5T178
BC015629 AAH15629 P61024
Q5T178
BC070319 AAH70319 P61024
Q5T178
BC070320 AAH70320 P61024
Q5T178
AF274941 AAK07518 P61024
Q5T178
AF274943 AAK07520 Q9BZU3
AF279897 AAK07553 P61024
Q5T178
BT007196 AAP35860 P61024
Q5T178
DQ890700 ABM81626  
DQ892972 ABM83898  
DQ893884 ABM84810  
DQ895958 ABM86884  
EU176486 ABW03287  
EU176487 ABW03288  
AK311769 BAG34712 Q5T178
X54941 CAA38702 P61024
Q5T178

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CKS1B NP_001817 M.musculus Cks1b 54124 Gene Info NP_058600 100
R.norvegicus Cks1b 499655   NP_001129221 100
A.gambiae AgaP_AGAP003796 1271535   XP_310353 74
A.thaliana CKS2 817341   NP_180364 72
D.melanogaster Cks85A 41034   NP_649817 72
C.elegans cks-1 177658   NP_501457 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta